So from what I can see it appears that you can't promote your BOs to Captain, despite the fact that there is text in the UI that states how many skill points one needs to spend to do so and despite the fact that I unlocked a Captain level BO skill from doing 9 level of Photonic Theory.
So what gives?
Can I level these guys or not and if so, how?
And that said, if there are Captain level skills, shouldn't there be Captain level BOs and ship stations?
Of course, that is a bug (reported, no response as yet), especially since I was only a Commander when I promoted her (accidentally and due to lag). Keeping her though. Even if she did out rank me for a while...