I got it to work for the most part with my wired 360 controller using the keybind files located in this message thread. Here are the changes I had to make:
1. I had to replace "(null)" with ""
2. I had to map joystick1 down to backward for ground combat.
3. For space combat I had to remap my face buttons for my BO skills. I think that's something that will be different for everyone.
It doesn't completely eliminate the need for the keyboard and mouse. I have issues like not being able to use the A button to pick up items when I'm in combat. It works fine outside combat. I still use the mouse for the map, hailing starfleet and accessing things through menus.
Overall the 360 controller isn't perfect but for combat it takes a lot of stress off my hands and wrists.
What is the command for face buttons for BO skills? I am assuming this means that you bind 1 button to every BO and then are able to select their skills? If so I'd really like to know since I am quickly runnng out of buttons binding to each BO skill seperately.