I hadn't had much trouble I couldn't attribute to my schizophrenic modem until a couple hours ago. Today was the first time the game hung up on me for a noticeable length of time without the influence of inclement weather on my end.
For anyone in the Midwest, and using Comcast, they've had some issues over the weekend that seem to be extending into the week: Comcast says it's fixed and some clients say it's not completely fixed yet. I haven't been on since earlier in the day but didn't have any issues then.
I have been having server lag for the past 7 days on STO. It is not on my end, other things work just fine with my internet connection. I have never experienced lag on STO before this week, so it is new for me, which leads me to think it is on STO's end. I get lag, and I also get random disconnects while in-game. I'm hoping once the S3 patch comes out things will smooth out.