I have been using this ship today after some of the updates to carriers. I was using the Interceptor deployables.
I noticed a few issues with the carrier commands. There were times when I would issue the recall command and then go to full impulse. Only one squadron would follow at full impulse. The other followed at normal speed and was left far behind. There was another time that after a battle, I ordered the recall and then moved to the next battle at normal speed and then issued the attack order. Not all fighters would attack. One time a whole squadron continued to follow me and did not engage the enemy ship like the other squadron. At another time, a single fighter continued to follow me while the other five would engage the enemy. I have not found what circumstances would actually cause this behavior. Only that it was inconsistent between each fighter command.