I just tried KA space elite with 2 quantum torpedoes, 2 phaser dual heavy cannons, 2 phaser consoles & 2 quantum consoles. I don't have hard numbers but I'm pretty sure I saw a significant increase in DPS. It was one of the fastest runs I've ever done.
If you don't have hard numbers then you don't have anything, and did not see anything.
Just because this run was faster than average, doesn't mean your one ship out of five ships was completely the deciding factor.
Maybe you had a handful of good players on the run, maybe you had someone wise enough to pack APB for the group.
Regardless, the only way to actually test your build is to run a combatlog and parse it.