Limit FPS will refuse to keep it's setting after exiting/starting the game. And V-sync doesn't seem to work while in a window, hitting 100+fps is causing excess heat, nothing damaging, but playing at 73c is better than playing at 85c..

What kind of Video Card do you have if I may ask? Most Video Cards have a built in program which you can set the settings for each game inside that program and it will load those settings instead of the games. Might want to look into that.

Nvidia's control panel V-sync doesn't work while in a window, at least not for STO.